Email updates

Keep up to date with the latest news and content from Automated Experimentation and BioMed Central.

Open Access Software

eCAT: Online electronic lab notebook for scientific research

Nigel H Goddard1*, Rory Macneil2 and Jonathan Ritchie3

Author Affiliations

1 School of Informatics, University of Edinburgh, 10 Crichton Street, Edinburgh, EH8 9AB, UK

2 Axiope Limited, 24 Fountainhall Road, Edinburgh EH9 2LW, UK

3 Axiope Limited,24 Fountainhall Road, Edinburgh EH9 2LW, UK

For all author emails, please log on.

Automated Experimentation 2009, 1:4  doi:10.1186/1759-4499-1-4

Published: 29 October 2009

Abstract

Background

eCAT is an electronic lab notebook (ELN) developed by Axiope Limited. It is the first online ELN, the first ELN to be developed in close collaboration with lab scientists, and the first ELN to be targeted at researchers in non-commercial institutions. eCAT was developed in response to feedback from users of a predecessor product. By late 2006 the basic concept had been clarified: a highly scalable web-based collaboration tool that possessed the basic capabilities of commercial ELNs, i.e. a permissions system, controlled sharing, an audit trail, electronic signature and search, and a front end that looked like the electronic counterpart to a paper notebook.

Results

During the development of the beta version feedback was incorporated from many groups including the FDA's Center for Biologics Evaluation & Research, Uppsala University, Children's Hospital Boston, Alex Swarbrick's lab at the Garvan Institute in Sydney and Martin Spitaler at Imperial College. More than 100 individuals and groups worldwide then participated in the beta testing between September 2008 and June 2009. The generally positive response is reflected in the following quote about how one lab is making use of eCAT: "Everyone uses it as an electronic notebook, so they can compile the diverse collections of data that we generate as biologists, such as images and spreadsheets. We use to it to take minutes of meetings. We also use it to manage our common stocks of antibodies, plasmids and so on. Finally, perhaps the most important feature for us is the ability to link records, reagents and experiments."

Conclusion

By developing eCAT in close collaboration with lab scientists, Axiope has come up with a practical and easy-to-use product that meets the need of scientists to manage, store and share data online. eCAT is already being perceived as a product that labs can continue to use as their data management and sharing grows in scale and complexity.